MOFA2 notebooks for view preparation, model fitting, diagnostics, and interpretation across named multi-omics views.

4 notebooks · view or download the QMD files below

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Prepare MOFA2 views

Source-backed Draft

Prepare named modality-specific numeric matrices using a documented sample-intersection and feature-selection baseline.

Fit a MOFA2 model

Source-backed Draft

Fit a MOFA2 model from prepared named views and record the choices needed to reproduce it.

MOFA2 diagnostics

Source-backed Draft

Load a fitted native MOFA2 model and check its latent structure before biological interpretation.

Interpret a MOFA2 model

Source-backed Draft

Examine factor scores, feature weights, and optional metadata associations from a fitted MOFA2 model.