Multi-omics with MOFA2
Fit one MOFA2 model from matched modality matrices, inspect variance and factors, and export weights and optional metadata associations.
- Input
- Feature-by-sample matrices from matched modalities.
- Analysis unit
- Sample.
- Outputs
- MOFA2 model, factor scores, variance explained, and feature weights.
- Key limit
- Factors are unsupervised; review preprocessing, missingness, and technical covariates before interpretation.